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SRX23510690: Bucorvus abyssinicus whole genome sequencing with 10X linked reads
1 ILLUMINA (Illumina NovaSeq 6000) run: 74.4M spots, 22.3G bases, 6.9Gb downloads

Design: manufacturer's protocol
Submitted by: G10K
Study: Bucorvus abyssinicus (Abyssinian ground hornbill) genome, bBucAby1, primary haplotype
show Abstracthide Abstract
The Abyssinian ground hornbill is found in the northern sub-Sahara Africa, in savanna and sub-desert scrub areas. This assembly has been produced as part of the G10K-VGP project. Sequencing was conducted with Pacific long reads, Bionano optical maps, and 10X Genomics libraries at the Rockefeller University Vertebrate Genomes Lab led by Olivier Fedrigo, HiC at Arima Genomics, and Illumina sequencing at NovaGene. Genome assembly was conducted by the Olivier Fedrigo and Marcela Uliano da Silva, and supervised by Arang Rhie, using the VGP 1.5 pipeline. The primary haplotype was assembled to chromosomes, whereas the alternate just as contigs. Funding was raised by Tom Gilbert and Erich Jarvis from B10K contributors and HHMI. The raw data and assembly are currently under a G10K-VGP publication embargo until removed from this description, following the G10K data use policy at the following URL: https://genome10k.soe.ucsc.edu/about/data_use_policy
Sample: Animal sample from Bucorvus abyssinicus
SAMN12614799 • SRS20361216 • All experiments • All runs
Library:
Name: bBucAby1_10X_4
Instrument: Illumina NovaSeq 6000
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 74.4M spots, 22.3G bases, 6.9Gb
Run# of Spots# of BasesSizePublished
SRR2784769874,443,52622.3G6.9Gb2024-02-02

ID:
31761412

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